December 2010
41 posts
From RNA-seq reads to differential expression results. http://ping.fm/MFCUx
Dec 26th
Amazon Fattens Up S3 Storage http://ping.fm/qHnBt
Dec 24th
Whole-exome sequencing for finding de novo mutations in sporadic mental retardation. http://ping.fm/wVdzP
Dec 24th
Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variatio… http://ping.fm/LC2uS
Dec 22nd
The Tree of Life: 10 benefits (for my career) of blogging/tweeting/etc from @phylogenomics http://ping.fm/mPB0T
Dec 22nd
Evaluation of affinity-based genome-wide DNA methylation data: Effects of CpG density, amplification bias, and copy… http://ping.fm/0aiXl
Dec 22nd
“Tunneling Electrode Junction” Device Could Sequence Human DNA in Minutes http://ping.fm/ag9jd
Dec 22nd
Identifying Cancer Driver Genes in Tumor Genome Sequencing Studies. http://ping.fm/WUSMe
Dec 22nd
New methods for next generation sequencing based microRNA expression profiling http://ping.fm/eYXj6
Dec 22nd
Sanger Institute, CRG Launch RGASP 3 with Lens Trained on RNA-seq Mapping Tools | GenomeWeb http://ping.fm/IsYnZ
Dec 22nd
Scaffolding pre-assembled contigs using SSPACE. http://ping.fm/eBlKo
Dec 20th
Using bioinformatics to predict the functional impact of SNVs. http://ping.fm/yid3W
Dec 19th
Alignment-free estimation of nucleotide diversity. http://ping.fm/VNUEu
Dec 19th
PE-Assembler: De novo assembler using short paired-end reads. http://ping.fm/L6wH4
Dec 19th
Words Lens For iPhone Translates Spanish To English http://ping.fm/ww2bs
Dec 19th
Amazon Moves VMware’s Virtual Machines to the Cloud http://ping.fm/YLkql
Dec 19th
Mugsy: Fast multiple alignment of closely related whole genomes. http://ping.fm/LDlBw
Dec 16th
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition. http://ping.fm/fQRyS
Dec 16th
1000 Genomes Project Tutorial Videos http://ping.fm/T4E9r
Dec 16th
Google Chrome Gets Ready For Business http://ping.fm/nvqkh
Dec 16th
Eucalyptus & Red Hat: The Cloud’s New Best Friends http://ping.fm/3YXai
Dec 16th
10 Best Reading and Productivity Apps http://ping.fm/LxAGa
Dec 16th
Targeted SNP discovery in Atlantic salmon (Salmo salar) genes using a 3’UTR-primed SNP detection approach. http://ping.fm/ROS1y
Dec 16th
What are some sanity checks that should be performed on NGS data? http://ping.fm/AQWL0
Dec 16th
Tip of the Week: RepTar, a database of miRNA target sites http://ping.fm/nv2uk
Dec 16th
VM Import - Bring Your VMware Images to The Cloud http://ping.fm/gFV8N
Dec 16th
Genome sequencing platforms compared for bacterial de novo assemblies http://ping.fm/4BTZG
Dec 16th
EpiChIP: gene-by-gene quantification of epigenetic modification levels. http://ping.fm/DZ8pC
Dec 12th
The cell is a messy place: understanding alternative splicing with RNA sequencing http://ping.fm/CMOVv
Dec 12th
US, European Teams Launch Parallel Challenges to Improve Computational Methods for Genome Assembly http://ping.fm/8VT0d
Dec 12th
Friday Links http://ping.fm/IDsxD
Dec 12th
As R&D Budgets Shrink and Data Grows, Bioinformatics Service Providers Could Gain in Popularity http://ping.fm/BkJQV
Dec 11th
Is Pacific Biosciences Really Polaroid Genomics? http://ping.fm/sR89w
Dec 11th
The Origin of the Haitian Cholera Outbreak Strain — NEJM Article & PDF http://ping.fm/BEMTg
Dec 10th
The Great Beyond: DNA sequencing traces Haiti cholera epidemic to South Asia http://ping.fm/tdnZp
Dec 10th
Great Mutation. Is It Functional? http://ping.fm/zIkdX
Dec 10th
YouTube - Biostatistics vs. Lab Research (Still cry laughing evertime I stumble onto this vid) http://ping.fm/PH5Hs
Dec 8th
Following a trend of articles I am reading - Correction of sequencing errors in a mixed set of reads. http://ping.fm/n8b3r
Dec 8th
Following a trend of articles I am reading - SHREC: a short-read error correction method. http://ping.fm/R8DEF
Dec 8th
HiTEC: accurate error correction in high-throughput sequencing data. http://ping.fm/hlVG1
Dec 8th
1 tag
A team from Hong Kong http://j.mp/e7fuN0 use bacterial based storage and encryption igem http://ping.fm/0JBgq
Dec 8th